Information for 6-AAACAAAGCT (Motif 6)

C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
Reverse Opposite:
T C G A A T C G T A G C C G A T A C G T C A G T T C A G C G A T G C A T G A C T
p-value:1e-14
log p-value:-3.240e+01
Information Content per bp:1.654
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif10.08%
Number of Background Sequences with motif1956.6
Percentage of Background Sequences with motif4.07%
Average Position of motif in Targets49.1 +/- 26.8bp
Average Position of motif in Background49.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAGCT
AAAACAAAGG-
 A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAGCT
VRRACAAWGG-
 A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAGCT
GGAACAAAGR-
 A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.75
Offset:-7
Orientation:forward strand
Alignment:-------AAACAAAGCT
CAAAAGTAAACAAAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAGCT
AAAACAATGG-
 A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AAACAAAGCT
--ACAAAG--
 C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AAACAAAGCT---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AAACAAAGCT---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAACAAAGCT
GTAAACAAT---
 A C G T A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------AAACAAAGCT
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A G C T A A G T C G C T A T G C A G C T A A T C G T A G C A G C T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C