Information for 12-AACAATCTGT (Motif 20)

G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T
Reverse Opposite:
T C G A A G T C C G T A T A C G C G T A A C G T A C G T C T A G A G C T C A G T
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.843
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif144.3
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets57.1 +/- 26.4bp
Average Position of motif in Background49.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AACAATCTGT
NAACAAT----
 A C G T G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AACAATCTGT
AACAAT----
 G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AACAATCTGT--
AAGAACATWHTGTTC
 A C G T A C G T A C G T G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AACAATCTGT
GTAAACAAT----
 A C G T A C G T A C G T G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AACAATCTGT--
VAGRACAKWCTGTYC
 A C G T A C G T A C G T G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AACAATCTGT--
VAGRACAKNCTGTBC
 A C G T A C G T A C G T G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AACAATCTGT-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AACAATCTGT--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AACAATCTGT-
-ACCATCTGTT
 G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----AACAATCTGT-
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T G C T A C T G A A G T C C G T A G T C A C G A T A T G C A C G T A C T G A G C T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T