Information for 10-GGAATTTCTGGCA (Motif 11)

A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A
Reverse Opposite:
C A G T A C T G A G T C A G T C C G T A A C T G C T G A G T C A G T C A A G C T A C G T A G T C A G T C
p-value:1e-12
log p-value:-2.882e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 25.9bp
Average Position of motif in Background73.1 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GGAATTTCTGGCA-
----GGTCTGGCAT
 A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCTGGCA
GGGAATTTCC----
 A C G T A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GGAATTTCTGGCA--
------NTTGGCANN
 A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGAATTTCTGGCA
NCTGGAATGC------
 A C G T A C G T A C G T A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GGAATTTCTGGCA
-------TTGGCA
 A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCTGGCA
GGGAATTTCC----
 A C G T A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GGAATTTCTGGCA-
------CTTGGCAA
 A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGAATTTCTGGCA
NTGGAATGTN-----
 A C G T A C G T A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGAATTTCTGGCA
CCWGGAATGY------
 A C G T A C G T A C G T A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGAATTTCTGGCA---
----TGTCTGDCACCT
 A C T G A C T G C G T A C T G A A C G T A C G T A G C T A G T C A C G T A C T G A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T