Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-145 | -3.346e+02 | 0.0000 | 176.0 | 22.00% | 688.4 | 1.46% | motif file (matrix) |
svg |
2 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-68 | -1.570e+02 | 0.0000 | 268.0 | 33.50% | 4917.3 | 10.46% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-48 | -1.126e+02 | 0.0000 | 404.0 | 50.50% | 12207.0 | 25.96% | motif file (matrix) |
svg |
4 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-29 | -6.685e+01 | 0.0000 | 105.0 | 13.12% | 1685.0 | 3.58% | motif file (matrix) |
svg |
5 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-28 | -6.549e+01 | 0.0000 | 227.0 | 28.38% | 6257.0 | 13.30% | motif file (matrix) |
svg |
6 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-26 | -5.996e+01 | 0.0000 | 110.0 | 13.75% | 1998.5 | 4.25% | motif file (matrix) |
svg |
7 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-20 | -4.800e+01 | 0.0000 | 141.0 | 17.62% | 3484.8 | 7.41% | motif file (matrix) |
svg |
8 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-20 | -4.769e+01 | 0.0000 | 82.0 | 10.25% | 1412.2 | 3.00% | motif file (matrix) |
svg |
9 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-19 | -4.398e+01 | 0.0000 | 132.0 | 16.50% | 3293.8 | 7.00% | motif file (matrix) |
svg |
10 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-19 | -4.378e+01 | 0.0000 | 89.0 | 11.12% | 1737.8 | 3.69% | motif file (matrix) |
svg |
11 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-18 | -4.214e+01 | 0.0000 | 86.0 | 10.75% | 1683.9 | 3.58% | motif file (matrix) |
svg |
12 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-17 | -4.123e+01 | 0.0000 | 139.0 | 17.38% | 3686.2 | 7.84% | motif file (matrix) |
svg |
13 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-17 | -3.940e+01 | 0.0000 | 78.0 | 9.75% | 1494.3 | 3.18% | motif file (matrix) |
svg |
14 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-16 | -3.843e+01 | 0.0000 | 94.0 | 11.75% | 2074.8 | 4.41% | motif file (matrix) |
svg |
15 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-14 | -3.368e+01 | 0.0000 | 75.0 | 9.38% | 1559.5 | 3.32% | motif file (matrix) |
svg |
16 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-12 | -2.790e+01 | 0.0000 | 72.0 | 9.00% | 1644.4 | 3.50% | motif file (matrix) |
svg |
17 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-11 | -2.693e+01 | 0.0000 | 36.0 | 4.50% | 508.0 | 1.08% | motif file (matrix) |
svg |
18 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-11 | -2.596e+01 | 0.0000 | 144.0 | 18.00% | 4718.6 | 10.03% | motif file (matrix) |
svg |
19 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-10 | -2.473e+01 | 0.0000 | 29.0 | 3.62% | 363.2 | 0.77% | motif file (matrix) |
svg |
20 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-10 | -2.443e+01 | 0.0000 | 24.0 | 3.00% | 249.4 | 0.53% | motif file (matrix) |
svg |
21 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-10 | -2.422e+01 | 0.0000 | 76.0 | 9.50% | 1937.8 | 4.12% | motif file (matrix) |
svg |
22 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-9 | -2.275e+01 | 0.0000 | 26.0 | 3.25% | 319.8 | 0.68% | motif file (matrix) |
svg |
23 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-9 | -2.172e+01 | 0.0000 | 54.0 | 6.75% | 1214.6 | 2.58% | motif file (matrix) |
svg |
24 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-8 | -1.933e+01 | 0.0000 | 26.0 | 3.25% | 377.7 | 0.80% | motif file (matrix) |
svg |
25 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-8 | -1.890e+01 | 0.0000 | 53.0 | 6.62% | 1282.8 | 2.73% | motif file (matrix) |
svg |
26 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-8 | -1.848e+01 | 0.0000 | 30.0 | 3.75% | 510.1 | 1.08% | motif file (matrix) |
svg |
27 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-7 | -1.640e+01 | 0.0000 | 64.0 | 8.00% | 1826.0 | 3.88% | motif file (matrix) |
svg |
28 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-6 | -1.580e+01 | 0.0000 | 49.0 | 6.12% | 1258.9 | 2.68% | motif file (matrix) |
svg |
29 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-6 | -1.561e+01 | 0.0000 | 33.0 | 4.12% | 683.9 | 1.45% | motif file (matrix) |
svg |
30 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-6 | -1.553e+01 | 0.0000 | 49.0 | 6.12% | 1270.8 | 2.70% | motif file (matrix) |
svg |
31 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-6 | -1.526e+01 | 0.0000 | 32.0 | 4.00% | 660.8 | 1.41% | motif file (matrix) |
svg |
32 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.497e+01 | 0.0000 | 42.0 | 5.25% | 1027.5 | 2.18% | motif file (matrix) |
svg |
33 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-5 | -1.231e+01 | 0.0000 | 43.0 | 5.38% | 1183.2 | 2.52% | motif file (matrix) |
svg |
34 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.201e+01 | 0.0001 | 23.0 | 2.88% | 456.4 | 0.97% | motif file (matrix) |
svg |
35 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-4 | -1.147e+01 | 0.0001 | 59.0 | 7.38% | 1902.6 | 4.05% | motif file (matrix) |
svg |
36 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-4 | -1.138e+01 | 0.0001 | 9.0 | 1.12% | 79.0 | 0.17% | motif file (matrix) |
svg |
37 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-4 | -1.129e+01 | 0.0001 | 57.0 | 7.12% | 1827.3 | 3.89% | motif file (matrix) |
svg |
38 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-4 | -1.085e+01 | 0.0002 | 54.0 | 6.75% | 1725.6 | 3.67% | motif file (matrix) |
svg |
39 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-4 | -1.067e+01 | 0.0002 | 49.0 | 6.12% | 1521.8 | 3.24% | motif file (matrix) |
svg |
40 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -1.014e+01 | 0.0004 | 39.0 | 4.88% | 1132.9 | 2.41% | motif file (matrix) |
svg |
41 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-4 | -9.651e+00 | 0.0006 | 42.0 | 5.25% | 1285.2 | 2.73% | motif file (matrix) |
svg |
42 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.666e+00 | 0.0015 | 37.0 | 4.62% | 1132.9 | 2.41% | motif file (matrix) |
svg |
43 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -8.422e+00 | 0.0019 | 44.0 | 5.50% | 1450.9 | 3.09% | motif file (matrix) |
svg |
44 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -8.415e+00 | 0.0019 | 105.0 | 13.12% | 4363.8 | 9.28% | motif file (matrix) |
svg |
45 |
| DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer | 1e-3 | -8.205e+00 | 0.0022 | 15.0 | 1.88% | 301.2 | 0.64% | motif file (matrix) |
svg |
46 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -8.126e+00 | 0.0023 | 18.0 | 2.25% | 407.7 | 0.87% | motif file (matrix) |
svg |
47 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.998e+00 | 0.0026 | 31.0 | 3.88% | 919.3 | 1.95% | motif file (matrix) |
svg |
48 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.931e+00 | 0.0027 | 77.0 | 9.62% | 3032.4 | 6.45% | motif file (matrix) |
svg |
49 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-3 | -7.868e+00 | 0.0028 | 11.0 | 1.38% | 183.9 | 0.39% | motif file (matrix) |
svg |
50 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.712e+00 | 0.0033 | 7.0 | 0.88% | 78.7 | 0.17% | motif file (matrix) |
svg |
51 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.663e+00 | 0.0034 | 22.0 | 2.75% | 574.3 | 1.22% | motif file (matrix) |
svg |
52 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.633e+00 | 0.0034 | 28.0 | 3.50% | 815.6 | 1.73% | motif file (matrix) |
svg |
53 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-3 | -7.257e+00 | 0.0048 | 31.0 | 3.88% | 962.6 | 2.05% | motif file (matrix) |
svg |
54 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -7.002e+00 | 0.0061 | 69.0 | 8.62% | 2741.7 | 5.83% | motif file (matrix) |
svg |
55 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -6.964e+00 | 0.0063 | 95.0 | 11.88% | 4041.3 | 8.59% | motif file (matrix) |
svg |
56 |
| STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer | 1e-3 | -6.937e+00 | 0.0063 | 28.0 | 3.50% | 855.0 | 1.82% | motif file (matrix) |
svg |
57 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.816e+00 | 0.0070 | 39.0 | 4.88% | 1343.1 | 2.86% | motif file (matrix) |
svg |
58 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.587e+00 | 0.0087 | 61.0 | 7.62% | 2396.9 | 5.10% | motif file (matrix) |
svg |
59 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.401e+00 | 0.0102 | 33.0 | 4.12% | 1105.3 | 2.35% | motif file (matrix) |
svg |
60 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.295e+00 | 0.0112 | 223.0 | 27.88% | 11000.9 | 23.39% | motif file (matrix) |
svg |
61 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.202e+00 | 0.0121 | 34.0 | 4.25% | 1164.6 | 2.48% | motif file (matrix) |
svg |
62 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.062e+00 | 0.0137 | 30.0 | 3.75% | 996.8 | 2.12% | motif file (matrix) |
svg |
63 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -5.956e+00 | 0.0150 | 44.0 | 5.50% | 1645.8 | 3.50% | motif file (matrix) |
svg |
64 |
| STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer | 1e-2 | -5.890e+00 | 0.0157 | 27.0 | 3.38% | 876.6 | 1.86% | motif file (matrix) |
svg |
65 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -5.834e+00 | 0.0164 | 93.0 | 11.62% | 4095.2 | 8.71% | motif file (matrix) |
svg |
66 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.674e+00 | 0.0189 | 18.0 | 2.25% | 510.0 | 1.08% | motif file (matrix) |
svg |
67 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-2 | -5.547e+00 | 0.0212 | 85.0 | 10.62% | 3725.8 | 7.92% | motif file (matrix) |
svg |
68 |
| Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-2 | -5.529e+00 | 0.0212 | 64.0 | 8.00% | 2663.1 | 5.66% | motif file (matrix) |
svg |
69 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-2 | -5.424e+00 | 0.0233 | 33.0 | 4.12% | 1179.9 | 2.51% | motif file (matrix) |
svg |
70 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.370e+00 | 0.0242 | 113.0 | 14.12% | 5214.2 | 11.09% | motif file (matrix) |
svg |
71 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.325e+00 | 0.0250 | 11.0 | 1.38% | 254.2 | 0.54% | motif file (matrix) |
svg |
72 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.153e+00 | 0.0292 | 25.0 | 3.12% | 838.6 | 1.78% | motif file (matrix) |
svg |
73 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.148e+00 | 0.0292 | 3.0 | 0.38% | 21.8 | 0.05% | motif file (matrix) |
svg |
74 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -5.008e+00 | 0.0329 | 30.0 | 3.75% | 1075.1 | 2.29% | motif file (matrix) |
svg |
75 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-2 | -4.923e+00 | 0.0353 | 30.0 | 3.75% | 1082.0 | 2.30% | motif file (matrix) |
svg |
76 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.869e+00 | 0.0368 | 54.0 | 6.75% | 2245.4 | 4.77% | motif file (matrix) |
svg |
77 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.784e+00 | 0.0395 | 66.0 | 8.25% | 2861.4 | 6.08% | motif file (matrix) |
svg |
78 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.768e+00 | 0.0397 | 30.0 | 3.75% | 1095.2 | 2.33% | motif file (matrix) |
svg |
79 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-2 | -4.711e+00 | 0.0414 | 14.0 | 1.75% | 395.2 | 0.84% | motif file (matrix) |
svg |
80 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.626e+00 | 0.0445 | 36.0 | 4.50% | 1391.4 | 2.96% | motif file (matrix) |
svg |