Information for 6-CWTTGTTTRCWNW (Motif 5)

T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T
Reverse Opposite:
C G T A G T A C C G A T T A C G G A C T T C G A T C G A G T C A A T G C G T C A C G T A C G T A A T C G
p-value:1e-18
log p-value:-4.152e+01
Information Content per bp:1.483
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.38%
Number of Background Sequences with motif291.2
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets46.0 +/- 28.5bp
Average Position of motif in Background47.0 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0019.1_Foxl1_1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CWTTGTTTRCWNW--
NNNTTTGTTTACATTTN
 A C G T A C G T T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

FOXC2/MA0846.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CWTTGTTTRCWNW
-TTTGTTTACTTA
 T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CWTTGTTTRCWNW--
NNNTTTGTTTACTTTTN
 A C G T A C G T T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CWTTGTTTRCWNW--
CTTTGTTTACTTTTN
 T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Foxk1/MA0852.1/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CWTTGTTTRCWNW--
NNNTTTGTTTACATTTN
 A C G T A C G T T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CWTTGTTTRCWNW--
NNNTTTGTTTACATTTN
 A C G T A C G T T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CWTTGTTTRCWNW
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CWTTGTTTRCWNW--
NNNTTTGTTTACNTTNN
 A C G T A C G T T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CWTTGTTTRCWNW--
NNNTTTGTTTACNTTNN
 A C G T A C G T T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CWTTGTTTRCWNW
---TGTTTACTTT
 T A G C G C A T C G A T C A G T T A C G C A G T A G C T A G C T C T G A A T G C G C T A C A G T G C A T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T