Information for 13-TTGTSCCTTK (Motif 27)

C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
Reverse Opposite:
T G A C G C T A T G C A T C A G A C T G T A G C G T C A G T A C G C T A C G T A
p-value:1e-7
log p-value:-1.813e+01
Information Content per bp:1.657
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif93.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets43.0 +/- 29.5bp
Average Position of motif in Background50.8 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTGTSCCTTK
CCATTGTTNY---
 A C G T A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TTGTSCCTTK-
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTGTSCCTTK
CCWTTGTYYB---
 A C G T A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TTGTSCCTTK-
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTGTSCCTTK
CTCATTGTC-----
 A C G T A C G T A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTGTSCCTTK
YCTTTGTTCC---
 A C G T A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGTSCCTTK
CTGTTCCTGG
 C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGTSCCTTK
CTTTGT------
 A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTGTSCCTTK
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGTSCCTTK
CCATTGTTTT---
 A C G T A C G T A C G T C G A T C G A T A C T G C A G T A T C G T G A C A G T C A C G T C G A T A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T