Information for 2-DNKNHCWRGGTCA (Motif 2)

C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G T G C A A G T C G T A C G A T C C G A T A C T G C A T G A G T C G T C A G A C T G C A T
p-value:1e-49
log p-value:-1.129e+02
Information Content per bp:1.607
Number of Target Sequences with motif165.0
Percentage of Target Sequences with motif20.62%
Number of Background Sequences with motif2537.4
Percentage of Background Sequences with motif5.40%
Average Position of motif in Targets50.3 +/- 24.5bp
Average Position of motif in Background49.1 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.82
Offset:5
Orientation:forward strand
Alignment:DNKNHCWRGGTCA--
-----CAAGGHCANV
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.81
Offset:3
Orientation:forward strand
Alignment:DNKNHCWRGGTCA
---BTCAAGGTCA
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.80
Offset:4
Orientation:reverse strand
Alignment:DNKNHCWRGGTCA-
----TCAAGGTCAN
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.79
Offset:4
Orientation:forward strand
Alignment:DNKNHCWRGGTCA--
----TCAAGGTCATA
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.79
Offset:3
Orientation:forward strand
Alignment:DNKNHCWRGGTCA
---ATCAAGGTCA
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.79
Offset:3
Orientation:forward strand
Alignment:DNKNHCWRGGTCA
---NTCAAGGTCA
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.78
Offset:4
Orientation:forward strand
Alignment:DNKNHCWRGGTCA-
----TCAAGGTCAT
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.78
Offset:7
Orientation:forward strand
Alignment:DNKNHCWRGGTCA
-------AGGTCA
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.78
Offset:1
Orientation:forward strand
Alignment:DNKNHCWRGGTCA-----
-TATTCAAGGTCATGCGA
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:forward strand
Alignment:DNKNHCWRGGTCA--
AAGTTCAAGGTCAGC
 C G T A C G T A C A G T T A C G G T A C A G T C C G T A C T A G C A T G A C T G A C G T A G T C C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C