Information for 13-TCAGGAAAAAAGAACC (Motif 18)

C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C
Reverse Opposite:
A C T G A C T G A C G T A G C T A G T C C G A T A C G T A C G T A C G T C G A T G A C T A G T C A G T C A C G T A T C G C G T A
p-value:1e-10
log p-value:-2.459e+01
Information Content per bp:1.677
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif54.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets52.8 +/- 25.9bp
Average Position of motif in Background49.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCAGGAAAAAAGAACC
TACTGGAAAAAAAA---
 A C G T C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCAGGAAAAAAGAACC---
----GGAAANTGAAACTNA
 C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAGGAAAAAAGAACC--
-GTTAAAAAAAAAAATTA
 C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C A C G T A C G T
A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCAGGAAAAAAGAACC-
-----GAAAMTGAAACT
 C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAGGAAAAAAGAACC
CAAAAGTAAACAAAG--
 A C G T C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCAGGAAAAAAGAACC-
---GCAAAACATTACTA
 C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C A C G T
A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCAGGAAAAAAGAACC
---GGAACAAAGR---
 C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCAGGAAAAAAGAACC-
AGAAGAACAAAGGACTA
 C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCAGGAAAAAAGAACC-
ATAAGAACAAAGGACTA
 C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCAGGAAAAAAGAACC
--TGGAAAA-------
 C G A T T A G C G T C A T C A G C T A G C T G A G C T A G T C A C G T A T C G A C G T A T C A G C T G A T G C A T G A C G T A C
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T