Information for 6-CAGAATGTCA (Motif 14)

T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A
Reverse Opposite:
A C G T C T A G C T G A A T G C C G T A A G C T C G A T G T A C C G A T A T C G
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.811
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif109.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets39.4 +/- 25.2bp
Average Position of motif in Background49.9 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CAGAATGTCA-
----NTGTCAN
 T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CAGAATGTCA---
-----TGTCANYT
 T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGAATGTCA
NTGGAATGTN-
 A C G T T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAGAATGTCA-
---RHTGWCAR
 T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAGAATGTCA-
---CCTGTCAA
 T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGAATGTCA
NTGGAATGTG-
 A C G T T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGAATGTCA--
GRACAGWMTGTYCTB
 A C G T A C G T A C G T T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGAATGTCA--
--VGCTGWCAVB
 T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGAATGTCA-
AAGGTCAAAAGGTCAA
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGAATGTCA---
GAGGTCAAAAGGTCAATG
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A C A T G G C T A T C G A A C G T A T C G A G C T G A T C C G T A A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G