Information for 7-CGGGTCACAGCTCTCC (Motif 10)

A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
Reverse Opposite:
C A T G T A C G T C G A A T C G T C G A T C A G A G T C G C A T T A C G C A G T T C A G T C G A A T G C G T A C G A T C T A C G
p-value:1e-13
log p-value:-3.103e+01
Information Content per bp:1.546
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif542.5
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets48.0 +/- 21.8bp
Average Position of motif in Background52.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CGGGTCACAGCTCTCC
-----CACAGN-----
 A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGGGTCACAGCTCTCC
----TCACACCT----
 A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGGTCACAGCTCTCC
-AGGTCANTGACCTN-
 A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGGGTCACAGCTCTCC
----TCACACCT----
 A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGGTCACAGCTCTCC
AGGGGTCAGAGGTCA--
 A C G T A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGGGTCACAGCTCTCC
------ACAGCTGTTV
 A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGGTCACAGCTCTCC
-AGGTCA---------
 A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTCACAGCTCTCC
CGCGCCGGGTCACGTA-----
 A C G T A C G T A C G T A C G T A C G T A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGGTCACAGCTCTCC
GGGGTCAAAGGTCA--
 A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGGGTCACAGCTCTCC
----TGACAGCTGTCA
 A T G C C T A G C A T G T A C G A C G T A G T C G T C A A T G C C G T A T A C G A G T C A G C T T A G C A G C T A T G C G T A C
A C G T A C G T A C G T A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A