Information for 9-GCTTTAATCCGTT (Motif 13)

A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T
Reverse Opposite:
T C G A G T C A G T A C A C T G C T A G C T G A C G A T C G A T C G T A C G T A C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.581e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 23.6bp
Average Position of motif in Background39.1 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0126.1_Obox6/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GCTTTAATCCGTT---
-CNATAATCCGNTTNT
 A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GCTTTAATCCGTT
---TTAATCCT--
 A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCTTTAATCCGTT
--TTTAAT-----
 A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCTTTAATCCGTT
---TTAATCCG--
 A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCTTTAATCCGTT
---TTAATCCC--
 A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCTTTAATCCGTT--
AATCGTTAATCCCTTTA
 A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCTTTAATCCGTT
--NYTAATCCYB-
 A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTAATCCGTT---
NNNATTAATCCGNTTNA
 A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTAATCCGTT---
NNNATTAATCCGNTTNA
 A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTAATCCGTT---
NTTGTTAATCCCTCTNN
 A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G C T A G T C G T A C C A T G A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A