Information for 2-ABAAAACGCTGTG (Motif 3)

C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
Reverse Opposite:
A G T C C T G A A G T C C G T A A C T G T A G C A T C G A C G T A C G T A C G T A C G T T C G A A C G T
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.866
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.3 +/- 23.1bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.63
Offset:7
Orientation:forward strand
Alignment:ABAAAACGCTGTG
-------GCTGTG
 C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ABAAAACGCTGTG
--BAACAGCTGT-
 C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
A C G T A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ABAAAACGCTGTG
---AACAGCTG--
 C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ABAAAACGCTGTG
------NGCTN--
 C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ABAAAACGCTGTG
---AACAGCTGTT
 C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
A C G T A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ABAAAACGCTGTG
GTATAAAAGGCGGGG
 A C G T A C G T C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ABAAAACGCTGTG
GTCATAAAAN------
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ABAAAACGCTGTG
GTATAAAAGGCGGGG
 A C G T A C G T C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ABAAAACGCTGTG-
--AAAATGCTGACT
 C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G A C G T
A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ABAAAACGCTGTG
CCAATAAAAA------
 A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A G T C A A T G C A C T G A G T C A C G T A C T G A G C T A C T G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T