Information for 3-GAGTCACGTG (Motif 12)

T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G
Reverse Opposite:
G T A C C G T A G T A C T C A G C G A T A T C G C G T A A G T C G A C T A T G C
p-value:1e-10
log p-value:-2.405e+01
Information Content per bp:1.690
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.41%
Number of Background Sequences with motif581.5
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets54.0 +/- 22.5bp
Average Position of motif in Background51.1 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.89
Offset:1
Orientation:forward strand
Alignment:GAGTCACGTG-
-GGTCACGTGC
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

TFEB/MA0692.1/Jaspar

Match Rank:2
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTG--
--GTCACGTGAT
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T A C G T
A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GAGTCACGTG-
-GGTCACGTGG
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T
A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

TFE3/MA0831.1/Jaspar

Match Rank:4
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTG--
--GTCACGTGNT
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T A C G T
A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.86
Offset:2
Orientation:forward strand
Alignment:GAGTCACGTG--
--GTCACGTGGT
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GAGTCACGTG--
-GGTCACGTGGC
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T A C G T
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:7
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GAGTCACGTG--
BRGTCACGTGAC
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T A C G T
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.85
Offset:1
Orientation:forward strand
Alignment:GAGTCACGTG-
-GGTCACGTGA
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

BHLHE41/MA0636.1/Jaspar

Match Rank:9
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTG--
--GTCACGTGAC
 T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T A C G T
A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GAGTCACGTG-
CCGGTCACGTGA
 A C G T T A C G C T G A T C A G G C A T A T G C C G T A A G T C C A T G G C A T C A T G A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A