Information for 8-CCCTGAGCTCTCCACA (Motif 9)

A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
Reverse Opposite:
A C G T A C T G A C G T C T A G A C T G C T G A A C T G G T C A A T C G A G T C A C G T A G T C G T C A A C T G A T C G A T C G
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.821
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 24.6bp
Average Position of motif in Background37.1 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCTGAGCTCTCCACA
--CGGAGC--------
 A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.57
Offset:9
Orientation:forward strand
Alignment:CCCTGAGCTCTCCACA
---------ATCCAC-
 A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCCTGAGCTCTCCACA
NNNGGGGCGCCCCCNN
 A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCCTGAGCTCTCCACA
----CAGCC-------
 A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:CCCTGAGCTCTCCACA
----------TCCCCA
 A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCCTGAGCTCTCCACA
GAGSCCGAGC--------
 A C G T A C G T A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CCCTGAGCTCTCCACA---
-------NWAACCACADNN
 A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGAGCTCTCCACA
TGCCTGCGYCMCCTT--
 A C G T A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGAGCTCTCCACA
NNNNTGAGCACTGTNNG
 A C G T A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CCCTGAGCTCTCCACA
---TGACCYCT-----
 A T G C A T G C A G T C A C G T A C T G C G T A A C T G A T G C A C G T G T A C A G C T A G T C A G T C G T C A A G T C G T C A
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T