Information for 3-GCAAAAAGCAGAGGCG (Motif 3)

A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
Reverse Opposite:
A T G C A C T G G T A C G A T C C A G T G T A C A C G T C T A G A G T C A G C T A C G T A G C T A G C T A G C T C T A G A T G C
p-value:1e-12
log p-value:-2.808e+01
Information Content per bp:1.734
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.3 +/- 22.7bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GCAAAAAGCAGAGGCG--
----CAGGCCNNGGCCNN
 A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAAGCAGAGGCG
CAATTGCAAAAATAT------
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GCAAAAAGCAGAGGCG
------CGCAGCTGCG
 A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

SPI1/MA0080.4/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCAGAGGCG
--AAAAAGCGGAAGTA
 A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
A C G T A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.47
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCAGAGGCG
--AGGAAACAGCTG--
 A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:6
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAAGCAGAGGCG
ATGCAACAGGTGG-----
 A C G T A C G T A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:GCAAAAAGCAGAGGCG
----AAAACAAAGG--
 A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCAGAGGCG
TGGAAAA----------
 A C G T A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.45
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCAGAGGCG
--AAAGATCAAAGG--
 A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G
A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.45
Offset:8
Orientation:forward strand
Alignment:GCAAAAAGCAGAGGCG-------
--------CAAAGGCGTGGCCAG
 A T C G A G T C T C G A C T G A C T G A C G T A T C G A C T A G A G T C T G C A C A T G G T C A C T A G A C T G G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G