Information for 14-CTAATCCCACCAG (Motif 29)

A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
Reverse Opposite:
A T G C C A G T C A T G A T C G C G A T C A T G C T A G T C A G C T G A C A G T A C G T C T G A T A C G
p-value:1e-5
log p-value:-1.248e+01
Information Content per bp:1.552
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 22.2bp
Average Position of motif in Background30.9 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCCCACCAG
GNNAGCTAATCCCCCN--
 A C G T A C G T A C G T A C G T A C G T A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTAATCCCACCAG
CTTAATCCC-----
 A C G T A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTAATCCCACCAG
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCCCACCAG
GCCMCGCCCMCY--
 A C G T A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTAATCCCACCAG---
CTATCCCCGCCCTATT
 A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G A C G T A C G T A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTAATCCCACCAG
GCTAATCCCC----
 A C G T A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTAATCCCACCAG----
ANNTNCCCACCCANNAC
 A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTAATCCCACCAG
GCTAATCC------
 A C G T A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTAATCCCACCAG
TTAATCCC-----
 A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTAATCCCACCAG
-TAATCCCN----
 A T G C G A C T T G C A G T C A G A C T A G T C G A T C G T A C G C T A T A G C G T A C G T C A A T C G
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T