Information for 11-GCCTCCCTGTCCA (Motif 27)

A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G T A C G C T G A A G T C C G T A C T A G A T C G A C T G C G T A A C T G A C T G A T G C
p-value:1e-5
log p-value:-1.376e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.9 +/- 27.1bp
Average Position of motif in Background48.4 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCTCCCTGTCCA---
GAGCCCTTGTCCCTAA
 A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCCTCCCTGTCCA
-----GCTGTCAA
 A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCCTCCCTGTCCA
-ACTTCCTGTT--
 A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A
A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCCTCCCTGTCCA
-----GCTGTG--
 A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCCTCCCTGTCCA
-----CCTGTCAA
 A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCCTCCCTGTCCA
---YCTTTGTTCC
 A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GCCTCCCTGTCCA
TACGAGACTCCTCTAAC-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T

PAX5/MA0014.2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GCCTCCCTGTCCA-
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GCCTCCCTGTCCA
GTCATGCHTGRCTGS---
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCCTCCCTGTCCA--
TGTTCCCATTGTGTACT
 A C G T A C G T A T C G A G T C A G T C A C G T A G T C A T G C A G T C A C G T A C T G A G C T A G T C A G T C C G T A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T