p-value: | 1e-8 |
log p-value: | -1.996e+01 |
Information Content per bp: | 1.853 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 2.36% |
Number of Background Sequences with motif | 91.9 |
Percentage of Background Sequences with motif | 0.19% |
Average Position of motif in Targets | 41.9 +/- 28.4bp |
Average Position of motif in Background | 46.9 +/- 30.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.09 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTTTGTAGGG CTGTTGCTAGGS |
|
|
|
PB0054.1_Rfx3_1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GTTTGTAGGG------ NTNNNNNGTTGCTANGGNNCANA |
|
|
|
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTTGTAGGG-- NNCGTTGCTATGGNN |
|
|
|
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTTTGTAGGG TTTTATKRGG |
|
|
|
PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTTGTAGGG-- NCCGTTGCTANGNGN |
|
|
|
MZF1(var.2)/MA0057.1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTTTGTAGGG---- ----GGAGGGGGAA |
|
|
|
SOX10/MA0442.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTTTGTAGGG CTTTGT---- |
|
|
|
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTTTGTAGGG-- --BTBRAGTGSN |
|
|
|
MEF2D/MA0773.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTTGTAGGG TCTATTTATAGN- |
|
|
|
E2F8/MA0865.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTTTGTAGGG--- -TTTGGCGGGAAA |
|
|
|