Information for 1-GMTTTCTCAGCYTTGY (Motif 1)

A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C
Reverse Opposite:
T C A G A G T C C G T A G T C A C T G A A C T G A T G C A G C T A C T G C G T A A T C G T G C A C G T A T C G A A C T G A G T C
p-value:1e-12
log p-value:-2.890e+01
Information Content per bp:1.740
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.2 +/- 28.2bp
Average Position of motif in Background53.5 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GMTTTCTCAGCYTTGY
---TTMACACCTT---
 A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GMTTTCTCAGCYTTGY
-----CTGACCTTTG-
 A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GMTTTCTCAGCYTTGY
NNTTTTCACACCTTNNN
 A C G T A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GMTTTCTCAGCYTTGY
TGCTGASTCAGC-----
 A C G T A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GMTTTCTCAGCYTTGY--
------TGACCTTTNCNT
 A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

MAFF/MA0495.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GMTTTCTCAGCYTTGY--
GCTGAGTCAGCAATTTTT
 A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GMTTTCTCAGCYTTGY
---TTCACACCTT---
 A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C
A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GMTTTCTCAGCYTTGY
NTTTTCACACCTT---
 A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GMTTTCTCAGCYTTGY-
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GMTTTCTCAGCYTTGY
--TTTCACACCT----
 A C T G G T A C A G C T C G A T A C G T A T G C A C G T G T A C C T G A T A C G T G A C A G C T A C G T A C G T C T A G A G T C
A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T