Information for 2-AGGTGGCCCCAGG (Motif 4)

C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G
Reverse Opposite:
A G T C A G T C C G A T A C T G A C T G C T A G A T C G A G T C A G T C C G T A A G T C T A G C A C G T
p-value:1e-11
log p-value:-2.730e+01
Information Content per bp:1.880
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.3 +/- 15.2bp
Average Position of motif in Background43.1 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGTGGCCCCAGG-
--WTGSCCTSAGGS
 C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G A C G T
A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGTGGCCCCAGG--
TGTCGTGACCCCTTAAT
 A C G T A C G T C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGTGGCCCCAGG
-GTGGGCCCCA--
 C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGGCCCCAGG--
NNANTTGACCCCTNNNN
 A C G T A C G T C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGGTGGCCCCAGG----
--NTNGCCTCAGGCNNN
 C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGGTGGCCCCAGG---
----GTCCCCAGGGGA
 C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGTGGCCCCAGG--
AAGGKGRCGCAGGCA
 C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGCCCCAGG
NNCAGGTGNN------
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGTGGCCCCAGG-
--ATGCCCTGAGGC
 C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGCCCCAGG
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G C T A G A T G C A G T C A G T C A G T C C G T A C T A G T A C G
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T