Information for 18-TCGCTGTGACCTG (Motif 27)

A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G C T A G A C G T A G T C C T G A A G T C C G T A A C T G T A G C A C T G C G T A
p-value:1e-4
log p-value:-1.075e+01
Information Content per bp:1.929
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.3 +/- 27.8bp
Average Position of motif in Background23.5 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR1/MA0112.3/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TCGCTGTGACCTG
AAGGTCACGGTGACCTG
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCGCTGTGACCTG
AGGNCANNGTGACCT-
 A C G T A C G T A C G T A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCGCTGTGACCTG
-----GTGACCTT
 A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCGCTGTGACCTG
GGTCANNGTGACCTN
 A C G T A C G T A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TCGCTGTGACCTG
------TGACCT-
 A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TCGCTGTGACCTG-
------TGACCTYA
 A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCGCTGTGACCTG
--GCTGTG-----
 A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TCGCTGTGACCTG---
------TGACCTTGAT
 A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCGCTGTGACCTG
TNCCTTTGATGT-
 A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TCGCTGTGACCTG--
-----NTGACCTTGA
 A C G T A G T C A T C G G T A C A C G T A C T G A G C T A C T G C G T A A G T C A T G C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A