Information for 13-AGAAAAAAAAAAA (Motif 24)

C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A
Reverse Opposite:
G A C T A C G T A G C T A C G T A G C T A G C T A G C T A C G T G A C T A G C T A G C T G T A C A G C T
p-value:1e-6
log p-value:-1.421e+01
Information Content per bp:1.726
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif110.5
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets54.3 +/- 27.9bp
Average Position of motif in Background55.3 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGAAAAAAAAAAA---
GTTAAAAAAAAAAATTA
 A C G T C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGAAAAAAAAAAA---
-AACAAACAACAAGAG
 C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGAAAAAAAAAAA
TACTGGAAAAAAAA
 A C G T C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAAAAAAAAAAA-
AAATAAGAAAAAAC
 C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGAAAAAAAAAAA
AAGATAAGATAACA
 A C G T C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGAAAAAAAAAAA
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAAAAAAAAAAA-
--GAAAMTGAAACT
 C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A A C G T
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAAAAAAAAAAA---
GTTCAAAAAAAAAATTC
 A C G T C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAAAAAAAAAAA
AGCCGAAAAAAAAAT-
 A C G T A C G T A C G T C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGAAAAAAAAAAA-
--AGAAACGAAAGT
 C T G A C A T G C T G A T C G A C G T A C G T A T C G A T C G A C T G A C G T A C T G A G T C A C T G A A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T