Information for 4-CCGCGATCGC (Motif 17)

G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C
Reverse Opposite:
T C A G G A T C A C T G G T C A A C G T A G T C T C A G A T G C T A C G C A T G
p-value:1e-7
log p-value:-1.696e+01
Information Content per bp:1.719
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif28.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets62.4 +/- 21.8bp
Average Position of motif in Background44.6 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCGCGATCGC
GTCCGCCATTA-
 A C G T A C G T G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCGCGATCGC----
GCGGCGATATCGCAGCG
 A C G T A C G T A C G T G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C A C G T A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGATCGC-
GCCGCCATCTTG
 A C G T G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Atf3/MA0605.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCGCGATCGC
ACGTCATC--
 G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGCGATCGC
-TCTTATCT-
 G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C
A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCGCGATCGC-
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCGCGATCGC-
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCGCGATCGC
AAACCGCAA----
 A C G T A C G T A C G T G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCGCGATCGC--
--CAAATCACTG
 G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCGCGATCGC
-YSTTATCT-
 G T A C A T G C A T C G A G T C T C A G C G T A A C G T T G A C C T A G A G T C
A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T