Information for 8-CCKARGAGCATCC (Motif 14)

A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
Reverse Opposite:
A T C G A C T G G T C A A C G T A C T G A G T C A G C T A G T C A G T C A C G T G T A C A C T G A C T G
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 23.5bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCKARGAGCATCC
---GGGAGGACNG
 A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCKARGAGCATCC
GCCTCAGGGCAT--
 A C G T A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCKARGAGCATCC
CCGCCCAAGGGCAG--
 A C G T A C G T A C G T A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCKARGAGCATCC
---CGGAGC----
 A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCKARGAGCATCC
TGCCCTNAGGGCA---
 A C G T A C G T A C G T A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CCKARGAGCATCC---
----GGACCACCCACG
 A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCKARGAGCATCC
TGCCCNNAGGGCA---
 A C G T A C G T A C G T A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCKARGAGCATCC--------
-----GTACATCCGGATTTTT
 A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCKARGAGCATCC
TGCCCTGAGGGCA---
 A C G T A C G T A C G T A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCKARGAGCATCC
-----CAGCC---
 A G T C A G T C A C T G C G T A C T A G A C T G C T G A A C T G A G T C C G T A A C G T A G T C A T G C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T