Information for 7-GTGGAGATTCTCC (Motif 13)

A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C
Reverse Opposite:
A C T G C T A G C T G A A C T G G T C A C G T A C G A T A G T C A C G T A G T C A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.882
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.3 +/- 18.0bp
Average Position of motif in Background50.2 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTGGAGATTCTCC
GTGGAT-------
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTGGAGATTCTCC-
--GGGGATTCCCCC
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGGAGATTCTCC-
-AGGGGATTCCCCT
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C A C G T
A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGGAGATTCTCC-
-AGGGGATTCCCCT
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTGGAGATTCTCC
--GGAAATTCCC-
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTGGAGATTCTCC
--GGAAATTCCC-
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAGATTCTCC
AATGGAAAAT----
 A C G T A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTGGAGATTCTCC
--GGAAATCCCC-
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGGAGATTCTCC
-NGGGGATTTCCC
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTGGAGATTCTCC
-TGGAAAA-----
 A C T G A C G T A C T G A C T G C G T A A C T G C G T A C G A T A C G T A G T C A G C T A G T C A G T C
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T