Information for 12-AATCAGACTD (Motif 17)

C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
Reverse Opposite:
G T C A T C G A A C T G A C G T A T G C A C G T A C T G C T G A A C G T G C A T
p-value:1e-9
log p-value:-2.172e+01
Information Content per bp:1.770
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif92.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets41.9 +/- 24.8bp
Average Position of motif in Background51.9 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AATCAGACTD
--BCAGACWA
 C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AATCAGACTD
--CCAGACAG
 C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AATCAGACTD--
--CCAGACRSVB
 C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AATCAGACTD
--TCACACCT
 C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATCAGACTD----
CAAATCCAGACATCACA
 A C G T A C G T A C G T C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATCAGACTD
--TCACACCT
 C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AATCAGACTD
--TCACACCT
 C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AATCAGACTD
CAAATCACTG--
 A C G T A C G T C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AATCAGACTD
--TCAGTCTT
 C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATCAGACTD
CCAATCAA----
 A C G T A C G T C G T A C G T A A G C T A G T C C G T A A T C G C G T A G T A C A G C T C A G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T