Information for 10-GAGGVGHTCTGATADT (Motif 13)

A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T
Reverse Opposite:
C T G A G A T C C G A T G T C A A C G T A G T C C G T A A C T G C G T A C A T G A T G C A G T C A G T C A G T C C G A T A G T C
p-value:1e-12
log p-value:-2.774e+01
Information Content per bp:1.743
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.4 +/- 24.2bp
Average Position of motif in Background31.0 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:1
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GAGGVGHTCTGATADT
CNGCTGNNGNNNNCAGATAA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T
T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGGVGHTCTGATADT
---GCCATCTGTT---
 A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGGVGHTCTGATADT
CTGNNNNNNNCAGATAAG
 A C G T A C G T A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T
T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G

PB0105.1_Arid3a_2/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAGGVGHTCTGATADT---
----NNATNTGATANNNNN
 A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAGGVGHTCTGATADT
----NNNANTGA----
 A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGGVGHTCTGATADT----
--AGAGTGCTGATTGGTCCA
 A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAGGVGHTCTGATADT
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGGVGHTCTGATADT
---ACCATCTGTT---
 A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GAGGVGHTCTGATADT
--------TTGATTGN
 A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GAGGVGHTCTGATADT-----
----TAAACTGATAAGAAGAT
 A C T G C G T A C T A G A C T G T C A G A T C G G T A C C G A T A G T C C G A T A C T G T G C A A C G T G C T A C A T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T