Information for 10-GCCACAGTAC (Motif 10)

A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A C G T A C T G A C G T A C T G A C T G A G T C
p-value:1e-13
log p-value:-2.998e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 22.5bp
Average Position of motif in Background44.7 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCACAGTAC
AAACCACAGAN-
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCCACAGTAC--
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCACAGTAC
NWAACCACADNN-
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCACAGTAC
--CACAGN--
 A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCCACAGTAC--
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCACAGTAC
NAAACCACAG---
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCACAGTAC
AAACCACAGC--
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCCACAGTAC-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCACAGTAC-------
TTCNAAGTACTTNNNNN
 A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCACAGTAC
AAACCACANN--
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A C G T C G T A A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T