Information for 9-CGCGTGCGGC (Motif 7)

A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A G T C C G T A A G T C A C T G A G T C A C T G
p-value:1e-4
log p-value:-1.093e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.8 +/- 28.9bp
Average Position of motif in Background50.1 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTGCGGC
NNCGCGTGNN--
 A C G T A C G T A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGCGTGCGGC
TGCGTG----
 A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGCGTGCGGC
GGCACGTGCC--
 A C G T A C G T A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCGTGCGGC-
NGCCTGAGGCN
 A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGCGTGCGGC
GCGCCTGCGCA
 A C G T A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGCGTGCGGC-
TGCCTGAGGCN
 A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTGCGGC
TTGCGTGCVA-
 A C G T A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCGTGCGGC-
NGCCTNAGGCN
 A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGCGTGCGGC-
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTGCGGC
TCACGTGC---
 A C G T A G T C A C T G A G T C A C T G A C G T A C T G A G T C A C T G A C T G A G T C
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T