Information for 7-CAAGGGACGCCTG (Motif 9)

A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G
Reverse Opposite:
G T A C C G T A A T C G A C T G A G T C A T C G A C G T A G T C A G T C A G T C A C G T A C G T A C T G
p-value:1e-10
log p-value:-2.449e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 21.6bp
Average Position of motif in Background48.7 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAGGGACGCCTG--
NNGGCCACGCCTTTN
 A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CAAGGGACGCCTG-
------AGGCCTNG
 A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGGACGCCTG
AACAAAGG-------
 A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGGACGCCTG---
TTNGGGTACGCCNNANN
 A C G T A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGGACGCCTG
NGTCCCNNGGGA------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGGACGCCTG
ATTCCCAAGGGAAT----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGGACGCCTG
TCACGTGACCGG--
 A C G T A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAAGGGACGCCTG
NRRGGGTCTT---
 A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAAGGGACGCCTG----
TACGAGACTCCTCTAAC
 A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGGACGCCTG
RACAAWGG-------
 A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G C G T A A T G C A C T G A G T C A T G C A C G T A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T