Information for 5-TAGGTCTAAG (Motif 8)

A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C T G C G T A G T A C A G T C A G C T T C G A
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.851
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif34.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.7 +/- 25.6bp
Average Position of motif in Background55.5 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TAGGTCTAAG
TATAAGTAGGTCAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGGTCTAAG---
-AGGTCAAGGTCA
 A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTCTAAG-----
NANAGATCAAAGGGNNN
 A C G T A C G T A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGGTCTAAG----
GAGGTCAAAGGTCA
 A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAGGTCTAAG---
-ACATCAAAGGNA
 A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T A C G T A C G T
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTCTAAG-----
NNNAGATCAAAGGANNN
 A C G T A C G T A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAGGTCTAAG-
-ACATCAAAGG
 A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAGGTCTAAG---
-AGGTCAAGGTCA
 A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T A C G T A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAGGTCTAAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGGTCTAAG------
AAAGGTCAAAGGTCAAC
 A C G T A G C T C T G A A C T G A C T G A C G T A G T C G A C T T G C A G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C