Information for 4-CGGGAGGCGCTGTTGT (Motif 7)

A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T
Reverse Opposite:
C G T A G T A C C G T A G T C A A G T C C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A G T C C T A G
p-value:1e-11
log p-value:-2.608e+01
Information Content per bp:1.936
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 14.3bp
Average Position of motif in Background24.3 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGGGAGGCGCTGTTGT-----
------GTNTTGTTGTGANNT
 A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGGAGGCGCTGTTGT-
--GGNGCGNCTGTTNNN
 A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGGAGGCGCTGTTGT
AGGGGGCGGGGCTG----
 A C G T A C G T A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGGAGGCGCTGTTGT----
---AAGACGCTGTAAAGCGA
 A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGGAGGCGCTGTTGT----
---AAGACGCTGTAAAGCGA
 A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGGAGGCGCTGTTGT----
---AGGACGCTGTAAAGGGA
 A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CGGGAGGCGCTGTTGT--
--------GCTGTGGTTT
 A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CGGGAGGCGCTGTTGT
-----GGCGCGCT---
 A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGGGAGGCGCTGTTGT
GGGGNGGGGC------
 A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGAGGCGCTGTTGT
GCCASCAGGGGGCGCYVNNG-
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G A C T G A C T G G T C A A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T C G A T A C T G A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T