Information for 5-GGAGCTGTCCCMGMCC (Motif 14)

A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C
Reverse Opposite:
A C T G A T C G A C G T A G T C A C T G T A C G A T C G A C T G T C G A A T G C C T G A A C T G A G T C A G C T A T G C A G T C
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.802
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.7 +/- 24.3bp
Average Position of motif in Background47.7 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGAGCTGTCCCMGMCC--
------GGCCCCGCCCCC
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGAGCTGTCCCMGMCC----
----TCGACCCCGCCCCTAT
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGAGCTGTCCCMGMCC----
----CTATCCCCGCCCTATT
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGTCCCMGMCC
CGGAGC-----------
 A C G T A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GGAGCTGTCCCMGMCC
--------CCCCCCCC
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GGAGCTGTCCCMGMCC-
-------GCCCCGCCCC
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAGCTGTCCCMGMCC-
-----TGACCTTGACCT
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGAGCTGTCCCMGMCC----
-----NRGCCCCRCCCHBNN
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAGCTGTCCCMGMCC
GGGGATTCCCCC----
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGAGCTGTCCCMGMCC-----
------GACCACGCCCTTATT
 A C T G A T C G C T G A A C T G G T A C A G C T A T C G A C G T A G T C A T G C A G T C G T A C A C T G T G C A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T