Information for 7-CAGCAGACACTBTGTG (Motif 9)

A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
Reverse Opposite:
A T G C G T C A T A G C C G T A T A C G C T G A A C T G G A C T A T C G C G A T A G T C A G C T A C T G A T G C G A C T A C T G
p-value:1e-11
log p-value:-2.703e+01
Information Content per bp:1.696
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.6 +/- 26.6bp
Average Position of motif in Background40.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGACACTBTGTG
AGCGGCACACACGCAA--
 A C G T A C G T A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGCAGACACTBTGTG
--CCAGACRSVB----
 A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CAGCAGACACTBTGTG
AGAGRRACAGCWGAC--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGCAGACACTBTGTG
VAGRACAKNCTGTBC-
 A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGCAGACACTBTGTG
--CCAGACAG------
 A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAGACACTBTGTG
GTCAGCANNTN-------
 A C G T A C G T A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGACACTBTGTG
CGAAGCACACAAAATA--
 A C G T A C G T A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCAGACACTBTGTG
TGAGTCAGCA-----------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CAGCAGACACTBTGTG
--BCAGACWA------
 A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CAGCAGACACTBTGTG
CTGAGTCAGCAATTT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G G T A C C T G A A C T G C G T A A T G C C G T A G T A C A G C T A T G C G A C T A C T G A C G T A T C G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T