Information for 3-YGAAKYAGARAGG (Motif 7)

A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A C G T A G T C A G C T C T G A G T C A A C G T A C G T A G T C C T G A
p-value:1e-11
log p-value:-2.740e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.4 +/- 25.4bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:YGAAKYAGARAGG-----
----GGAGAAAGGTGCGA
 A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:YGAAKYAGARAGG
-GAAAGTGAAAGT
 A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YGAAKYAGARAGG
-GAAACTGAAACT
 A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----YGAAKYAGARAGG----
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PAX4/MA0068.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YGAAKYAGARAGG
CTAATTAG-----
 A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G
A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G A C G T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YGAAKYAGARAGG
-GAAASYGAAASY
 A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:YGAAKYAGARAGG
-GRAASTGAAAST
 A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---YGAAKYAGARAGG
BAGTCATANTGAAAG-
 A C G T A C G T A C G T A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

IRF8/MA0652.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-YGAAKYAGARAGG
TCGAAACCGAAACT
 A C G T A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:YGAAKYAGARAGG--
AGAAAGTGAAAGTGA
 A G C T A C T G C G T A C G T A A C G T A G C T C T G A A C T G C G T A C T A G C G T A A C T G A C T G A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A