Information for 4-CMTGTTCCTCTASACA (Motif 5)

G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A T G C A C G T C G T A A C T G C T G A A C T G T C A G C G T A T C G A A T G C G C T A A C G T A C T G
p-value:1e-12
log p-value:-2.957e+01
Information Content per bp:1.746
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.9 +/- 17.2bp
Average Position of motif in Background39.8 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CMTGTTCCTCTASACA
------CGTCTAGACA
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CMTGTTCCTCTASACA
----TTCCTCT-----
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CMTGTTCCTCTASACA-----
----CAAATCCAGACATCACA
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CMTGTTCCTCTASACA-
-----WWATRTAAACAN
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CMTGTTCCTCTASACA
-CACTTCCTCT-----
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A
A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:CMTGTTCCTCTASACA-
---------CCAGACAG
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CMTGTTCCTCTASACA
-----NSCACTYVAV-
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CMTGTTCCTCTASACA---
--------AATAAACAATN
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CMTGTTCCTCTASACA-
---------GTAAACAA
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CMTGTTCCTCTASACA-
---------GTAAACAA
 G T A C G T C A C A G T A T C G A C G T C G A T A G T C A G T C A G C T G T A C C G A T G T C A A T C G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A