Information for 3-GCGCTGAGGGMTCCGC (Motif 4)

A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
Reverse Opposite:
A T C G A G T C A C T G A T C G C T G A A C T G G T A C A G T C A G T C A C G T A T G C C G T A A T C G T A G C T C A G A G T C
p-value:1e-14
log p-value:-3.372e+01
Information Content per bp:1.772
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.9 +/- 29.6bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCGCTGAGGGMTCCGC
ATGCCCTGAGGC------
 A C G T A C G T A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCGCTGAGGGMTCCGC
TGCCCTGAGGGCA----
 A C G T A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTGAGGGMTCCGC
TGCCCTNAGGGCA----
 A C G T A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTGAGGGMTCCGC
TGCCCTNAGGGCA----
 A C G T A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTGAGGGMTCCGC
WTGSCCTSAGGS------
 A C G T A C G T A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTGAGGGMTCCGC
NNGCNCTGCGCGGC----
 A C G T A C G T A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.48
Offset:8
Orientation:forward strand
Alignment:GCGCTGAGGGMTCCGC----
--------GGCCCCGCCCCC
 A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.47
Offset:5
Orientation:forward strand
Alignment:GCGCTGAGGGMTCCGC
-----GTGGGCCCCA-
 A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--GCGCTGAGGGMTCCGC
NTGCCCANNGGTNA----
 A C G T A C G T A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.47
Offset:9
Orientation:forward strand
Alignment:GCGCTGAGGGMTCCGC
---------GCTCCG-
 A C T G A G T C A T C G A T G C A C G T A T C G G T C A A C T G C T A G A C T G T G A C A G C T A T G C A G T C A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T