Information for 12-CACCTGATRW (Motif 30)

A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
Reverse Opposite:
C G T A A G T C C G T A A G C T A G T C C T G A T A C G A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.402e+01
Information Content per bp:1.790
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif65.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets49.3 +/- 34.3bp
Average Position of motif in Background42.6 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MLX/MA0663.1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CACCTGATRW
ATCACGTGAT--
 A C G T A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CACCTGATRW
ATCACGTGAT--
 A C G T A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CACCTGATRW
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:4
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CACCTGATRW
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CACCTGATRW
CACGTGNT--
 A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CACCTGATRW
GTCACGTGAT--
 A C G T A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CACCTGATRW
ACCACGTGAC--
 A C G T A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CACCTGATRW
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CACCTGATRW
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CACCTGATRW
NCACGTGACN-
 A C G T A G T C C G T A A G T C A T G C A G C T A C T G C T G A C G A T T C A G G C A T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T