Information for 16-CCATAWGATGTCA (Motif 27)

A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C C G T A A C G T A G T C C G T A A C G T C T G A A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.536e+01
Information Content per bp:1.881
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 29.9bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OLIG2/MA0678.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCATAWGATGTCA
ACCATATGGT----
 A C G T A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCATAWGATGTCA
ACCATATGTT----
 A C G T A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCATAWGATGTCA
ACCATATGTT----
 A C G T A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCATAWGATGTCA
AACATATGTT----
 A C G T A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCATAWGATGTCA
GCCATATGGT----
 A C G T A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCATAWGATGTCA
ACCATATGGT----
 A C G T A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCATAWGATGTCA-
-AAGATGATGTCAT
 A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A A C G T
A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CCATAWGATGTCA
-----ARNTGACA
 A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CCATAWGATGTCA-
------RHTGWCAR
 A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCATAWGATGTCA
ANCATATGTT----
 A C G T A G T C A G T C C G T A A G C T C G T A C G A T A C T G T C G A A C G T A C T G C G A T A G T C C G T A
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T