Information for 4-TCCCCGGCTG (Motif 20)

A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G
Reverse Opposite:
T A G C C G T A A T C G A G T C A G T C A T C G A C T G A C T G C T A G C G T A
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.795
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.91%
Number of Background Sequences with motif562.5
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets59.9 +/- 23.1bp
Average Position of motif in Background49.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCCCCGGCTG
TCCCCA----
 A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCCCCGGCTG
TTCCCGCCWG
 A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCCCGGCTG--
CCCCCTGCTGTG
 A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCCCCGGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCCCGGCTG
VDTTTCCCGCCA-
 A C G T A C G T A C G T A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCCCGGCTG
TTCCNGGAAG
 A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCCCGGCTG-----
TCNCCTGCTGNGNNN
 A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TCCCCGGCTG
-----NGCTN
 A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCCCCGGCTG--
GACCCCCCGCTGTG
 A C G T A C G T A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCCCCGGCTG
NNTTCCCGCCC-
 A C G T A C G T A C G T G A T C A G T C T G A C T A G C C T A G T C A G A T G C C G A T A T C G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T