Information for 2-AGCAGRGCTCAGKAAT (Motif 2)

T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
Reverse Opposite:
G T C A C G A T A G C T G T A C T G A C A G C T A C T G T G C A A C T G A T G C A G T C A G T C A C G T A C T G A G T C A C G T
p-value:1e-17
log p-value:-4.130e+01
Information Content per bp:1.680
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif39.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets51.9 +/- 24.8bp
Average Position of motif in Background49.0 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGCAGRGCTCAGKAAT
CGAACAGTGCTCACTAT-
 A C G T A C G T T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGCAGRGCTCAGKAAT
--CAAAGGTCAG----
 T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCAGRGCTCAGKAAT
CACAGN----------
 T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGCAGRGCTCAGKAAT
-CNAGGCCT-------
 T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGCAGRGCTCAGKAAT
---AGRGGTCA-----
 T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCAGRGCTCAGKAAT
GGCGAGGGGTCAAGGGC
 A C G T T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCAGRGCTCAGKAAT
--CAGGCCNNGGCCNN
 T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGCAGRGCTCAGKAAT
--CAAAGGTCAAGGG-
 T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGRGCTCAGKAAT
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----AGCAGRGCTCAGKAAT
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T T G C A T C A G A G T C C G T A C T A G T C A G T A C G A G T C A C G T A G T C C T G A A C T G A C T G T C G A C G T A C A G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T