Information for 8-AKGTACTCASCATMCA (Motif 10)

C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
Reverse Opposite:
C G A T C A T G A C G T G C T A A C G T A T C G A T G C A G C T A C T G C G T A A C T G G A C T C T G A G A T C T G A C A G C T
p-value:1e-11
log p-value:-2.685e+01
Information Content per bp:1.641
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif41.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets43.5 +/- 25.8bp
Average Position of motif in Background46.3 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AKGTACTCASCATMCA
AAGCACTTAA------
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AKGTACTCASCATMCA
-CTGAGTCAGCAATTT
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AKGTACTCASCATMCA
AGCCACTCAAG-----
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AKGTACTCASCATMCA
-----GTCAGCANNTN
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AKGTACTCASCATMCA
-ATGACTCAGCAD---
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AKGTACTCASCATMCA-
--HWWGTCAGCAWWTTT
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A A C G T
A C G T A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AKGTACTCASCATMCA--
GCTGAGTCAGCAATTTTT
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AKGTACTCASCATMCA
MRSCACTYAA------
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AKGTACTCASCATMCA
--TGAGTCAGCA----
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AKGTACTCASCATMCA
-ATGACTCAGCANWWT
 C T G A A C T G C T A G A G C T C T G A G T A C A C G T T G A C C T G A T A C G A T G C G T C A C G A T T G C A G T A C G C T A
A C G T T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T