Information for 5-CACATGCATKGCAYTC (Motif 6)

A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
Reverse Opposite:
A C T G G T C A C T G A C G A T A C T G A G T C G T A C G T C A G A C T A C T G G T A C C T G A A C G T C T A G A G C T C T A G
p-value:1e-11
log p-value:-2.703e+01
Information Content per bp:1.709
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets64.4 +/- 20.1bp
Average Position of motif in Background52.4 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACATGCATKGCAYTC
GACCACATTCATACAAT--
 A C G T A C G T A C G T A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACATGCATKGCAYTC
-ACATTCATGACACG-
 A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCATKGCAYTC
GHATATKCAT-------
 A C G T A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CACATGCATKGCAYTC
AYATGYATATGCATR------
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CACATGCATKGCAYTC
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CACATGCATKGCAYTC
GAATATTCAT-------
 A C G T A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CACATGCATKGCAYTC
CACATTCCAT------
 A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CACATGCATKGCAYTC
-RCATTCCWGG-----
 A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CACATGCATKGCAYTC
CACATTCCAT------
 A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.48
Offset:10
Orientation:forward strand
Alignment:CACATGCATKGCAYTC--
----------ACATTCCA
 A G T C C T G A A G T C C G T A A G C T C A T G G T A C C T G A A C G T A C T G T C A G G T A C C G T A A G C T C A G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A