Information for 1-RGGGTCTCGMSRG (Motif 4)

C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G
Reverse Opposite:
A T G C A G T C A T C G A C T G A G T C A C T G C G T A A C T G C G T A A G T C A G T C A G T C A G C T
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.873
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.8 +/- 23.4bp
Average Position of motif in Background54.0 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:RGGGTCTCGMSRG---
-GGNTCTCGCGAGAAC
 C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G A C G T A C G T A C G T
A C G T T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--RGGGTCTCGMSRG
NRRGGGTCTT-----
 A C G T A C G T C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:RGGGTCTCGMSRG---
----TCTCGCGAGAAT
 C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

ZBTB33/MA0527.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:RGGGTCTCGMSRG-----
---CTCTCGCGAGATCTG
 C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----RGGGTCTCGMSRG
NTNNNGGGGTCANGNNN-
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RGGGTCTCGMSRG
--GGTCCCGCCC-
 C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RGGGTCTCGMSRG
--TGTCTAGACG-
 C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G
A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----RGGGTCTCGMSRG
CGCGCCGGGTCACGTA--
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---RGGGTCTCGMSRG-
AATGGGGTATCACGTTT
 A C G T A C G T A C G T C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----RGGGTCTCGMSRG
AGAGCGGGGTCAAGTA--
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G C T A G A C T G A C G T A G T C A C G T A G T C A C T G G T A C A T G C T C A G A T C G
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T