Information for 4-GTGGGAARGCCTT (Motif 5)

A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
Reverse Opposite:
G C T A G T C A C T A G T A C G T A G C A G C T A C G T A C G T G A T C G T A C A G T C G T C A A T G C
p-value:1e-13
log p-value:-3.003e+01
Information Content per bp:1.695
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif6.22%
Number of Background Sequences with motif141.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets46.3 +/- 29.2bp
Average Position of motif in Background52.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGAARGCCTT
CSTGGGAAAD----
 A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTGGGAARGCCTT
GGCGGGAARN----
 A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTGGGAARGCCTT
GGGCGGGAAGG----
 A C G T A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGGGAARGCCTT
CWGGCGGGAA------
 A C G T A C G T A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTGGGAARGCCTT
GGGCGGGAAGG----
 A C G T A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGGGAARGCCTT
TGGCGGGAAAHB---
 A C G T A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGGGAARGCCTT
AGGTGTGAAA-----
 A C G T A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGGGAARGCCTT
AAGGTGTKAA------
 A C G T A C G T A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGGGAARGCCTT
AAGGTGTGAAA-----
 A C G T A C G T A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGAARGCCTT
NATGGAAAAN----
 A C G T A T C G A C G T A C T G C A T G C T A G C G T A T G C A T C G A A C T G A T G C G A T C A C G T C G A T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T