Information for 5-GGGCTTCTTCACACTC (Motif 13)

C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G A C G T A C T G G T C A C G T A A C T G G T C A C G T A A T C G A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.161e+01
Information Content per bp:1.934
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 23.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX20/MA0689.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC-
------CTTCACACCTA
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC----
---NNTTTTCACACCTTNNN
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC-
----NTTTTCACACCTT
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC-
-------TTCACACCTT
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC
------TTTCACACCT
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC-
------TTTCACACCTN
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC
--------TCACACCT
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC-
-------TTMACACCTT
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC
------KTTCACACCT
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GGGCTTCTTCACACTC
--------TCACACCT
 C T A G A C T G A C T G A T G C C G A T C A G T A G T C A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T