Information for 4-CATGBTGGGAGCTGCA (Motif 12)

A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
Reverse Opposite:
A G C T A T C G A G T C C T G A A C T G A G T C A G C T A G T C G T A C A G T C C G T A T A G C G T A C C G T A A C G T A C T G
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.797
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 21.8bp
Average Position of motif in Background82.6 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CATGBTGGGAGCTGCA
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATGBTGGGAGCTGCA
RGSMTBCTGGGAAAT---
 A C G T A C G T A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATGBTGGGAGCTGCA
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATGBTGGGAGCTGCA
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CATGBTGGGAGCTGCA
------CGGAGC----
 A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CATGBTGGGAGCTGCA
CAATGCATTGTGGGTA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATGBTGGGAGCTGCA
CAAGATGGCGGC----
 A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATGBTGGGAGCTGCA
NNNNTTGTGTGCTTNN
 A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATGBTGGGAGCTGCA---
GCATTCTGGGAATTGTAGTT
 A C G T A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A A C G T A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CATGBTGGGAGCTGCA
CCTGCTGAGH------
 A G T C C G T A C G A T A C T G A C T G A C G T A C T G A C T G A C T G C T G A A C T G A G T C A G C T C T A G A T G C C T G A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T