Information for 9-CTGCTCTGAACAA (Motif 8)

G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A
Reverse Opposite:
G A C T C G A T A T C G A C G T A C G T A T G C C G T A C A T G C G T A T A C G G T A C C G T A C A T G
p-value:1e-10
log p-value:-2.373e+01
Information Content per bp:1.752
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif34.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.4 +/- 24.2bp
Average Position of motif in Background52.0 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTGCTCTGAACAA------
--NNNNNGAACAATTGANN
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGCTCTGAACAA----
AAAATATGCATAATAAA
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

PB0183.1_Sry_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCTCTGAACAA------
--TCACGGAACAATAGGTG
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CTGCTCTGAACAA-
--------AACAAT
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CTGCTCTGAACAA----
-------GAACAATGGN
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGCTCTGAACAA---
--NTTNAGAACAATTA
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGCTCTGAACAA---
------RNAACAATGG
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTGCTCTGAACAA----
-------RAACAATGGN
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGCTCTGAACAA-------
----AATGAACAATGGAATT
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGCTCTGAACAA---
------GGAACAAAGR
 G A T C C G A T A C T G A T G C A C G T G T A C A C G T A T C G T C G A C G T A T A G C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G