Information for 4-GTAATTACAA (Motif 5)

C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A
Reverse Opposite:
G A C T C A G T A C T G G C A T G T C A C T G A G A C T G C A T C G T A G T A C
p-value:1e-11
log p-value:-2.644e+01
Information Content per bp:1.652
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.51%
Number of Background Sequences with motif1322.2
Percentage of Background Sequences with motif2.78%
Average Position of motif in Targets56.1 +/- 26.3bp
Average Position of motif in Background49.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0061.1_Hoxb6/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GTAATTACAA---
NNNGTAATTACNNATA
 A C G T A C G T A C G T C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A A C G T A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0072.1_Hoxc8/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GTAATTACAA-
TTGGGGTAATTAACGT
 A C G T A C G T A C G T A C G T A C G T C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GTAATTACAA
GCTAATTAAC-
 A C G T C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A
T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTAATTACAA---
AAGGTAATTACCTAAT
 A C G T A C G T A C G T C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PH0071.1_Hoxc6/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GTAATTACAA---
CAAATTAATTAATAAAA
 A C G T A C G T A C G T A C G T C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A A C G T A C G T A C G T
A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

PH0022.1_Dlx3/Jaspar

Match Rank:6
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GTAATTACAA--
TCGCGATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

Dlx2/MA0885.1/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTAATTACAA
GCAATTAA--
 C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTAATTACAA
AGTAATTAAC-
 A C G T C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTAATTACAA
CCAATTAC--
 C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTAATTACAA
GGTAATTAAA-
 A C G T C A T G G C A T C G T A C T G A G A C T C A G T C G T A T G A C G T C A C T G A
C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T