Information for 3-CWCTAGGRGCTGCAVT (Motif 3)

A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
Reverse Opposite:
G C T A A C T G A C G T A T C G G T A C C G T A T A C G A G T C A G C T G T A C A G T C A C G T C G T A A C T G C G T A C T A G
p-value:1e-21
log p-value:-4.973e+01
Information Content per bp:1.671
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif28.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.4 +/- 24.2bp
Average Position of motif in Background50.8 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CWCTAGGRGCTGCAVT
NGNTCTAGAACCNGV---
 A C G T A C G T A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CWCTAGGRGCTGCAVT
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CWCTAGGRGCTGCAVT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CWCTAGGRGCTGCAVT
CTACTAGGATGTNNTN-
 A C G T A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CWCTAGGRGCTGCAVT
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CWCTAGGRGCTGCAVT
--GGAGGGGGAA----
 A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CWCTAGGRGCTGCAVT
--CTAATKGV------
 A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CWCTAGGRGCTGCAVT
TGCGCATAGGGGAGGAG--
 A C G T A C G T A C G T A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CWCTAGGRGCTGCAVT
TGTCTAGACG-------
 A C G T A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CWCTAGGRGCTGCAVT
AANTTCAAGTGGCTTN---
 A C G T A C G T A C G T A G T C G C A T A G T C A C G T C G T A C T A G C A T G T C G A C T A G A T G C C G A T A C T G T A G C T C G A T G A C C A G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T A C G T